Bug #7644
LDAP Resource contention leads to InterruptedNamingException
100%
Description
Noticed a lot of Exceptions in the cn-process-daemon.log file in /var/log/dataone/daemon directory that contains the text 'Interrupted during LDAP operation'
The exception is thrown from this class: http://grepcode.com/file/repository.grepcode.com/java/root/jdk/openjdk/7u40-b43/com/sun/jndi/ldap/Connection.java?av=f#477
[ERROR] 2016-02-16 18:49:01,059 (ReplicaAuditingDelegate:isCNodeReplica:126) Unable to get node from node registry service for node ref: urn:node:CN
org.dataone.service.exceptions.ServiceFailure: Interrupted during LDAP operation
at org.dataone.service.cn.impl.v2.NodeRegistryService.getNode(NodeRegistryService.java:161)
[ERROR] 2016-02-16 11:23:13,128 (ReplicaAuditingDelegate:isCNodeReplica:126) Unable to get node from node registry service for node ref: urn:node:PISCO
org.dataone.service.exceptions.ServiceFailure: Interrupted during LDAP operation
at org.dataone.service.cn.impl.v2.NodeRegistryService.getNode(NodeRegistryService.java:161)
[ERROR] 2016-02-16 11:29:14,620 (ReplicaAuditingDelegate:isCNodeReplica:126) Unable to get node from node registry service for node ref: urn:node:SANPARKS
org.dataone.service.exceptions.ServiceFailure: Interrupted during LDAP operation
[ERROR] 2016-02-16 11:18:29,659 (StdOutErrLog$2:print:51) 31336114 [SynchronizeTask10] ERROR org.dataone.cn.ldap.LDAPService - Could not set up TLS connection, using non-secure communication
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) javax.naming.InterruptedNamingException: Interrupted during LDAP operation
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.Connection.readReply(Connection.java:488)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapClient.extendedOp(LdapClient.java:1204)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapCtx.extendedOperation(LdapCtx.java:3207)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.cn.ldap.LDAPService.getContext(LDAPService.java:79)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.service.cn.impl.v2.ReserveIdentifierService.lookupReservedIdentifiers(ReserveIdentifierService.java:478)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.service.cn.impl.v2.ReserveIdentifierService.expireEntries(ReserveIdentifierService.java:412)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.service.cn.impl.v2.ReserveIdentifierService.hasReservation(ReserveIdentifierService.java:299)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.cn.batch.synchronization.NodeCommSyncObjectFactory$1.hasReservation(NodeCommSyncObjectFactory.java:155)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.cn.batch.synchronization.tasks.V2TransferObjectTask.processNewObject(V2TransferObjectTask.java:418)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.cn.batch.synchronization.tasks.V2TransferObjectTask.processTask(V2TransferObjectTask.java:380)
[ERROR] 2016-02-16 11:18:29,661 (StdOutErrLog$2:print:51) at org.dataone.cn.batch.synchronization.tasks.V2TransferObjectTask.call(V2TransferObjectTask.java:197)
[ERROR] 2016-02-16 11:18:29,662 (StdOutErrLog$2:print:51) at org.dataone.cn.batch.synchronization.tasks.V2TransferObjectTask.call(V2TransferObjectTask.java:108)
[ERROR] 2016-02-16 11:18:29,662 (StdOutErrLog$2:print:51) at java.util.concurrent.FutureTask.run(FutureTask.java:262)
[ERROR] 2016-02-16 11:18:29,662 (StdOutErrLog$2:print:51) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[ERROR] 2016-02-16 11:18:29,662 (StdOutErrLog$2:print:51) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[ERROR] 2016-02-16 11:18:29,662 (StdOutErrLog$2:print:51) at java.lang.Thread.run(Thread.java:745)
[ERROR] 2016-02-16 12:00:22,956 (StdOutErrLog$2:print:51) 33849411 [pool-11-thread-4] ERROR org.dataone.cn.ldap.ServiceMethodRestrictionsAccess - Problem search Nodes for Nodelist
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) javax.naming.InterruptedNamingException: Interrupted during LDAP operation; remaining name 'dc=org'
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.Connection.readReply(Connection.java:488)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapClient.getSearchReply(LdapClient.java:640)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapClient.search(LdapClient.java:563)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:1986)
ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapCtx.searchAux(LdapCtx.java:1848)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.ldap.LdapCtx.c_search(LdapCtx.java:1773)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.toolkit.ctx.ComponentDirContext.p_search(ComponentDirContext.java:386)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.search(PartialCompositeDirContext.java:356)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.search(PartialCompositeDirContext.java:339)
[ERROR] 2016-02-16 12:00:22,957 (StdOutErrLog$2:print:51) at javax.naming.directory.InitialDirContext.search(InitialDirContext.java:267)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.cn.ldap.ServiceMethodRestrictionsAccess.getServiceMethodRestrictionList(ServiceMethodRestrictionsAccess.java:126)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.service.cn.impl.v2.NodeRegistryService.listNodes(NodeRegistryService.java:117)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.service.cn.replication.auditor.v1.strategy.CoordinatingNodeReplicaAuditingStrategy.auditCNodeReplicas(CoordinatingNodeReplicaAuditingStrategy.java:114)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.service.cn.replication.auditor.v1.strategy.CoordinatingNodeReplicaAuditingStrategy.auditPid(CoordinatingNodeReplicaAuditingStrategy.java:104)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.service.cn.replication.auditor.v1.strategy.CoordinatingNodeReplicaAuditingStrategy.auditPids(CoordinatingNodeReplicaAuditingStrategy.java:86)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.service.cn.replication.auditor.v1.task.CoordinatingNodeReplicaAuditTask.call(CoordinatingNodeReplicaAuditTask.java:55)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at org.dataone.service.cn.replication.auditor.v1.task.CoordinatingNodeReplicaAuditTask.call(CoordinatingNodeReplicaAuditTask.java:39)
[ERROR] 2016-02-16 12:00:22,958 (StdOutErrLog$2:print:51) at java.util.concurrent.FutureTask.run(FutureTask.java:262)
[ERROR] 2016-02-16 12:00:22,959 (StdOutErrLog$2:print:51) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[ERROR] 2016-02-16 12:00:22,959 (StdOutErrLog$2:print:51) at java.lang.Thread.run(Thread.java:745)
ERROR] 2016-02-16 12:00:22,960 (CoordinatingNodeReplicaAuditingStrategy:auditCNodeReplicas:228) UNable to get node list from node registry service
org.dataone.service.exceptions.ServiceFailure: Interrupted during LDAP operation
at org.dataone.cn.ldap.ServiceMethodRestrictionsAccess.getServiceMethodRestrictionList(ServiceMethodRestrictionsAccess.java:158)
at org.dataone.service.cn.impl.v2.NodeRegistryService.listNodes(NodeRegistryService.java:117)
at org.dataone.service.cn.replication.auditor.v1.strategy.CoordinatingNodeReplicaAuditingStrategy.auditCNodeReplicas(CoordinatingNodeReplicaAuditingStrategy.java:114)
at org.dataone.service.cn.replication.auditor.v1.strategy.CoordinatingNodeReplicaAuditingStrategy.auditPid(CoordinatingNodeReplicaAuditingStrategy.java:104)
Associated revisions
refs #7644
LDAP Resource contention leads to InterruptedNamingException. Trying to determine why downstream projects are not testing out appropriately. In doing so, i have updated the tests associated with ApacheDSSuiteRunner. Upgraded to the latest version of ApacheDS. The upgrade led to several other modifications since ApacheDS not longer assumes 'localhost' is the default address for its Transport Layer, rather its gets the default from InetAddress.getLocalHost().getHostName() and in the future will use its own abstraction: Network.LOOPBACK_HOSTNAME.
refs #7644
LDAP Resource contention leads to InterruptedNamingException. Trying to determine why downstream projects are not testing out appropriately. In doing so, i have updated the tests associated with ApacheDSSuiteRunner. Upgraded to the latest version of ApacheDS. The upgrade led to several other modifications since ApacheDS not longer assumes 'localhost' is the default address for its Transport Layer, rather its gets the default from InetAddress.getLocalHost().getHostName() and in the future will use its own abstraction: Network.LOOPBACK_HOSTNAME.
refs #7644
LDAP Resource contention leads to InterruptedNamingException. Trying to determine why downstream projects are not testing out appropriately. In doing so, i have updated the tests associated with ApacheDSSuiteRunner. Upgraded to the latest version of ApacheDS. The upgrade led to several other modifications since ApacheDS not longer assumes 'localhost' is the default address for its Transport Layer, rather its gets the default from InetAddress.getLocalHost().getHostName() and in the future will use its own abstraction: Network.LOOPBACK_HOSTNAME.
refs #7644
LDAP Resource contention leads to InterruptedNamingException. Trying to determine why downstream projects are not testing out appropriately. In doing so, i have updated the tests associated with ApacheDSSuiteRunner. Upgraded to the latest version of ApacheDS. The upgrade led to several other modifications since ApacheDS not longer assumes 'localhost' is the default address for its Transport Layer, rather its gets the default from InetAddress.getLocalHost().getHostName() and in the future will use its own abstraction: Network.LOOPBACK_HOSTNAME.
refs #7644
Added documentation about how to generate ApacheDS schema from OpenLDAP Schema. Regenerated the dataone-schema to test it out. Added access control at the dc=org level and reduced the number of rule sets.
refs #7644
Added documentation about how to generate ApacheDS schema from OpenLDAP Schema. Regenerated the dataone-schema to test it out. Added access control at the dc=org level and reduced the number of rule sets.
refs #7644
LDAP Resource contention leads to InterruptedNamingException. Added in apache commons pool to manage LDAP context connections. Refactored LdapService to remove from the base class instantiation of dircontext.
Added in unit tests for pooling mechanism
refs #7644
LDAP Resource contention leads to InterruptedNamingException. Added in apache commons pool to manage LDAP context connections. Refactored LdapService to remove from the base class instantiation of dircontext.
Added in unit tests for pooling mechanism
refs #7644
Refactored library to use pooling of ldap contexts. Abstracted NodeRegistryService interface from implementation, hopefully for use in future rewrites that will decouple dependency on the NodeRegistry implementation. Added in NodeFacade that acts as a public abstraction layer over the LDAP DAO classes.
refs #7644
Refactored library to use pooling of ldap contexts. Abstracted NodeRegistryService interface from implementation, hopefully for use in future rewrites that will decouple dependency on the NodeRegistry implementation. Added in NodeFacade that acts as a public abstraction layer over the LDAP DAO classes.
refs #7644
Refactored library to use pooling of ldap contexts. Abstracted NodeRegistryService interface from implementation, hopefully for use in future rewrites that will decouple dependency on the NodeRegistry implementation. Added in NodeFacade that acts as a public abstraction layer over the LDAP DAO classes.
refs #7644
Refactored library to use pooling of ldap contexts. Abstracted NodeRegistryService interface from implementation, hopefully for use in future rewrites that will decouple dependency on the NodeRegistry implementation. Added in NodeFacade that acts as a public abstraction layer over the LDAP DAO classes.
refs #7644
Refactored library to use pooling of ldap contexts. Refactored Unit Testing to use ApacheDS.
refs #7644
Refactored library to use pooling of ldap contexts. Refactored Unit Testing to use ApacheDS.
refs #7644
Refactored library to use pooling of ldap contexts. Refactored Unit Testing to use ApacheDS. Added in additional test from earlier commit that I did not catch in an update.
refs #7644
Refactored library to use pooling of ldap contexts. Refactored Unit Testing to use ApacheDS. Added in additional test from earlier commit that I did not catch in an update.
refs #7644
Updated to use new LDAP pooling mechanism. added in Facade to include synchronization only LDAP interactions. Moved and renamed service interfaces.
refs #7644
Updated to use new LDAP pooling mechanism. added in Facade to include synchronization only LDAP interactions. Moved and renamed service interfaces.
refs #7644
Updated to use new LDAP pooling mechanism. added in Facade to include log aggregation only LDAP interactions.
refs #7644
Updated to use new LDAP pooling mechanism. added in Facade to include log aggregation only LDAP interactions.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
Updated to use new LDAP pooling mechanism.
refs #7644
increased a couple default pooling property values
refs #7644
increased a couple default pooling property values
refs #7644
wrong package name
refs #7644
wrong package name
refs #7644
something is spawning off threads creating ldap dir contexts
refs #7644
something is spawning off threads creating ldap dir contexts
refs #7644
something is spawning off threads creating ldap dir contexts. Close is being called but threads and connections are not actually closed.
refs #7644
something is spawning off threads creating ldap dir contexts. Close is being called but threads and connections are not actually closed.
refs #7644
something is spawning off threads creating ldap dir contexts. Changing default values to test connection close problem.
refs #7644
something is spawning off threads creating ldap dir contexts. Changing default values to test connection close problem.
refs #7644
something is spawning off threads creating ldap dir contexts. forcing a close, even though documentation states is not necessary.
refs #7644
something is spawning off threads creating ldap dir contexts. forcing a close, even though documentation states is not necessary.
refs #7644
something is spawning off threads creating ldap dir contexts. Try to suppress the running of idle object eviction threads.
refs #7644
something is spawning off threads creating ldap dir contexts. Try to suppress the running of idle object eviction threads.
refs #7644
something is spawning off threads creating ldap dir contexts. Close tls connection before closing dirContext.
refs #7644
something is spawning off threads creating ldap dir contexts. Close tls connection before closing dirContext.
refs #7644
something is spawning off threads creating ldap dir contexts. Close tls connection after closing dirContext. Getting a lot of communication exceptions.
refs #7644
something is spawning off threads creating ldap dir contexts. Close tls connection after closing dirContext. Getting a lot of communication exceptions.
refs #7644
something is spawning off threads creating ldap dir contexts. Still getting Comm exceptions due to TLS close. Try to remove listener that prints out the message before closing TLS.
refs #7644
something is spawning off threads creating ldap dir contexts. Still getting Comm exceptions due to TLS close. Try to remove listener that prints out the message before closing TLS.
refs #7644
something is spawning off threads creating ldap dir contexts. was not removing entries from a map after connections closed. changed info level log messages to debug.
refs #7644
something is spawning off threads creating ldap dir contexts. was not removing entries from a map after connections closed. changed info level log messages to debug.
refs #7644
Missed a spot in SessionAuthorizationFilterStrategy
refs #7644
Missed a spot in SessionAuthorizationFilterStrategy
refs #7644
Refactored for use of Apache Directory Server Tests.
refs #7644
Refactored for use of Apache Directory Server Tests.
refs #7644
Cleaning up a few imports
refs #7644
Cleaning up a few imports
refs #7644
verification method was not reporting when the LDAP connection has become stale.
refs #7644
verification method was not reporting when the LDAP connection has become stale.
refs #7644
Oops. completed NodeRegistryLogAggregationServiceImpl by calling respective methods in NodeRegistryLogAggregationFacade.
refs #7644
Oops. completed NodeRegistryLogAggregationServiceImpl by calling respective methods in NodeRegistryLogAggregationFacade.
refs #7644
setAggregateLogs back to true even if an exception has occurred. In other words, keep retrying a failing member node until log aggregation is turned off manually.
refs #7644
setAggregateLogs back to true even if an exception has occurred. In other words, keep retrying a failing member node until log aggregation is turned off manually.
refs #7644
Fixing import statements. Formatting
refs #7644
Fixing import statements. Formatting
History
#1 Updated by Robert Waltz about 8 years ago
- Target version set to CCI-2.2.0
#2 Updated by Robert Waltz almost 8 years ago
- % Done changed from 0 to 30
- Status changed from New to In Progress
#3 Updated by Robert Waltz almost 8 years ago
- % Done changed from 30 to 50
- Status changed from In Progress to Testing
#4 Updated by Robert Waltz almost 8 years ago
- Status changed from Testing to Closed
- % Done changed from 50 to 100
