DataONE Tasks: Issueshttps://redmine.dataone.org/https://redmine.dataone.org/favicon.ico2018-10-02T16:51:19ZDataONE Tasks
Redmine Member Nodes - Task #8723 (New): tDAR: Implemented IP Whitelisting on tDAR systems / Impacts to r...https://redmine.dataone.org/issues/87232018-10-02T16:51:19ZMonica Ihliemail@monicaihli.com
<p>tdar has implemented IP whitelisting on their member node. Requests from IP addresses not whitelisted will be refused. Was provided CN IPs for production. The reports that ping Tdar MN for up status will fail unless it happens to be executed from an IP that can be provided. This may or may not be considered a big enough issue to do something about. No harm is actually being done as long as the CNs can get in and do their business. </p>
Member Nodes - MNDeployment #8009 (New): Geometabolomehttps://redmine.dataone.org/issues/80092017-01-31T21:41:45ZLaura Moyerslmoyers1@utk.edu
<p>Email from Aron Stubbins (<a href="mailto:Aron.Stubbins@skio.uga.edu">Aron.Stubbins@skio.uga.edu</a>) 6 December 2016:</p>
<blockquote>
<p>Myself, Rob Fatland (ccd) and an international team of researchers have been developing a data system for dissolved organic matter data that provides novel, standardized ways to process the data allowing better comparison of data across studies, state-of-the-science processing to groups outside of the core groups developing these techniques, plus other more common data system attributes (archiving, indexing, DOIs etc.).</p>
<p>We have been developing on a shoestring budget and to make the system sustainable and fully functional for the community, we need some additional support. Could we discuss how we might tie into DataONE both functionally (potential connections between data bases) and where we might get funding through DataONE or related programs.</p>
</blockquote>
<p>Rob Fatland (<a href="mailto:rob5@uw.edu">rob5@uw.edu</a>) said in subsequent email 14 December 2016:</p>
<blockquote>
<p>I think that the technical steps will not be terribly daunting when we get ready to coordinate with DataONE and it follows the API-driven federation model which we favor, so that's great. </p>
</blockquote>
<p>NEXT STEPS: Laura to set up exploratory meeting with Geometabolome.</p>
Member Nodes - MNDeployment #7973 (New): Alaska Energy Data Gatewayhttps://redmine.dataone.org/issues/79732017-01-27T15:19:28ZLaura Moyerslmoyers1@utk.edu
<p>At a meeting 26 January 2017, it was mentioned that GINA is working with the Alaska Energy Data Gateway on a proposal where there is a component for implementing a DataONE Member Node for AEDG. This is still very early in the proposal stage, but the possibility exists for an AEDG MN in future.</p>
Member Nodes - MNDeployment #7851 (New): CESAB - Center for Synthesis and Analysis for Biodiversityhttps://redmine.dataone.org/issues/78512016-07-22T13:57:50ZLaura Moyerslmoyers1@utk.edu
<p><a href="http://www.cesab.org/index.php/fr/">http://www.cesab.org/index.php/fr/</a> (in French)</p>
<p>CESAB is the Synthesis and Analysis center for biodiversity data in France. In a meeting with ECOSCOPE and CESAB on 21 July (see epad <a href="https://epad.dataone.org/pad/p/ECOSCOPE_and_DataONE">https://epad.dataone.org/pad/p/ECOSCOPE_and_DataONE</a>), Alison Specht said that CESAB is interesting in working with DataONE, particularly as a Member Node. </p>
<p>CESAB doesn't have a data discovery portal at the moment, but they do have about 5 projects which have delivered data, some of which is exposed and some of which is metadata-only. There are ~100,000, objects, another project with ~6,000 objects coming soon. Some of these are private (metadata is public but data is private). There is some EML metadata, but it has been difficult to create appropriate EML metadata for some contributors.</p>
<p>First steps are to continue discussions and gather information about CESAB's current and future content and identify the best MN solution for them.</p>
Member Nodes - MNDeployment #7549 (New): COS - the Center for Open Sciencehttps://redmine.dataone.org/issues/75492015-12-14T21:10:21ZLaura Moyerslmoyers1@utk.edu
<p>This is to document activity related to the possible collaboration with COS as a Member Node. See website <a href="https://cos.io/">https://cos.io/</a></p>
Member Nodes - MNDeployment #7163 (New): UN Environmental Programme World Conservation Monitoring...https://redmine.dataone.org/issues/71632015-06-07T17:14:16ZLaura Moyerslmoyers1@utk.edu
<p>Key holding: World database of protected lands<br>
Dependencies: They are in the process of implementing CSW. So, we need the slender node and we need them to get their CSW up.<br>
Location: Cambridge, England</p>
Python GMN - Story #7095 (New): Support HTTP redirect capability for GMN within the Vendor Specif...https://redmine.dataone.org/issues/70952015-05-12T16:20:39ZMark Servillamark.servilla@gmail.com
<p>GMN provides proxy capabilities to integrate existing content residing in a back-end data repository through its Vendor Specific Extension model. Only minimal support exists within the GMN-VSE model for HTTP redirects. Although the use of HTTP redirects is more of an exception within the the GMN-VSE model, it can provide a flexible mechanism for MNs who dynamically manage data and metadata objects.</p>
Member Nodes - MNDeployment #3520 (New): ARCTOS Collaborative Collection Management Solutionhttps://redmine.dataone.org/issues/35202013-01-25T19:33:16ZRebecca Koskelarkoskela@unm.edu
<p>Arctos is a collaborative Collection Management Information System that currently serves over 1.7 million records from multiple natural history collections. The data reside in an Oracle database administered by the Texas Advanced Computing Center. We are looking for off-site options for data backup and disaster recovery, and would like to discuss the possibility of partnering with DataONE for this purpose. Perhaps we can set up a conference call to discuss this?</p>
<p>Contacts:Carla Cicero <a href="mailto:ccicero@berkeley.edu">ccicero@berkeley.edu</a> <br>
Dusty McDonald <a href="mailto:dustymc@gmail.com">dustymc@gmail.com</a>,<br>
Chris Jordan <a href="mailto:ctjordan@tacc.utexas.edu">ctjordan@tacc.utexas.edu</a>,<br>
Link Olson <a href="mailto:leolson@alaska.edu">leolson@alaska.edu</a>,<br>
Gordon Jarrell <a href="mailto:gordon.jarrell@gmail.com">gordon.jarrell@gmail.com</a></p>
<p>Conference Call on 24 January 2013</p>
Member Nodes - MNDeployment #3519 (New): Prairie Research Institutehttps://redmine.dataone.org/issues/35192013-01-25T19:03:58ZJohn Cobbjohnw.cobb+dataoneRM@gmail.com
<p>on 20130125 LT call, Dave V. mentioned a conversation with Randy Butler about the Prarie Research Institute.</p>
<p>The following is a snippet form ePad <a href="http://epad.dataone.org/2013Jan25-LT-VTC">http://epad.dataone.org/2013Jan25-LT-VTC</a></p>
<p>Discussion with Randy Butler also touched on interest by the various Illinois Surveys (Prarie Research Institute) (e.g. Natural History Survey, Geological Survey, Hydrological Survey) on how they can participate in DataONE, perhaps as a set of Member Nodes. NH Survey likely to be the first candidate according to Randy ("endangered data").</p>
Infrastructure - Task #3333 (New): Generalize mk_* scripts for host namehttps://redmine.dataone.org/issues/33332012-10-11T18:50:14ZDave Vieglaisdave.vieglais@gmail.com
<p>There is currently a dependency of "-1" in the hostname for the various custom check_mk custom plugins. </p>
<p>This should be generalized at some point.</p>
<p>This didn't work:</p>
<p>testhost=$(echo $thishost | sed s/-[a-z]*-([0-9])/-${host}-\1/)</p>
Member Nodes - MNDeployment #3258 (New): CitSci.org MNhttps://redmine.dataone.org/issues/32582012-09-20T20:44:30ZBruce Wilsonbwilso27@utk.edu
<p>CitSci.org provides a toolset, including the hosting of data, for citizen science (PPSR -- public participation in science and research) projects. CitSci.org currently hosts data from approximately 50 such projects. Greg Newman (Colorado State University) is the lead on CitSci.org and is a member of the PPSR working group. </p>
<p>Handling of streaming (mutable) data is a key need. </p>
Infrastructure - Bug #3246 (New): Metacat returns 500 instead of 404 in some caseshttps://redmine.dataone.org/issues/32462012-09-11T02:00:24ZDave Vieglaisdave.vieglais@gmail.com
<p>For example:</p>
<p><a href="https://knb.ecoinformatics.org/knb/d1/mn/v1/bogus">https://knb.ecoinformatics.org/knb/d1/mn/v1/bogus</a></p>
<p>should return a 404 NotFound error, but instead returns a 500, ServiceFailure. </p>
<p>This is not an urgent issue, but should probably be cleaned up.</p>
Infrastructure - Task #2286 (New): Change Exceptions.InvalidToken to Exceptions.InvalidSessionhttps://redmine.dataone.org/issues/22862012-02-03T02:57:36ZRoger Dahldahl@unm.eduRequirements - Requirement #580 (New): (Requirement) All software developed on the project should...https://redmine.dataone.org/issues/5802010-04-15T22:52:38ZDave Vieglaisdave.vieglais@gmail.com
<p>It is necessary (desired and indicted in proposal) that all products developed on the project would be released with an appropriate, recognized open source license.</p>
<p>h2. Rationale</p>
<p>Open source is a good thing. See <a href="http://www.opensource.org/docs/definition.php">http://www.opensource.org/docs/definition.php</a> for more details.</p>
<p>h2. Fit Criteria</p>
<ul>
<li>All software developed on the project includes an approved open source license</li>
<li>Selected licenses do not conflict with the licenses used by components that are extended or utilized by custom software developed on the project</li>
<li>A software license audit can be successfully passed. </li>
</ul>
Requirements - Requirement #317 (In Progress): (Requirement) Identifiers for all objectshttps://redmine.dataone.org/issues/3172010-03-10T16:57:35ZDave Vieglaisdave.vieglais@gmail.com
<p>All objects in the <a class="wiki-page new" href="https://redmine.dataone.org/projects/d1req/wiki/DataONE">DataONE</a> system have an identifier that is unique within all of the <a class="wiki-page new" href="https://redmine.dataone.org/projects/d1req/wiki/DataONE">DataONE</a> infrastructure and can be used to retrieve the object from the system.</p>
<p>Rationale:</p>
<p>Unique identifiers provide the fundamental, low level mechanism for<br>
interacting with content stored in the <a class="wiki-page new" href="https://redmine.dataone.org/projects/d1req/wiki/DataONE">DataONE</a> system. Unique identifiers help prevent duplication and improve re-usability of information.</p>
<p>Fit Criteria:</p>
<ul>
<li><p>Any object stored within <a class="wiki-page new" href="https://redmine.dataone.org/projects/d1req/wiki/DataONE">DataONE</a> receives an identifier that is unique within the <a class="wiki-page new" href="https://redmine.dataone.org/projects/d1req/wiki/DataONE">DataONE</a> infrastructure.</p></li>
<li><p>Any object with a <a class="wiki-page new" href="https://redmine.dataone.org/projects/d1req/wiki/DataONE">DataONE</a> identifier can be retrieved from the infrastructure.</p></li>
<li><p>Attempts to create a duplicate identifier are prevented.</p></li>
</ul>